PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID evm.model.supercontig_158.7
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; malvids; Brassicales; Caricaceae; Carica
Family bZIP
Protein Properties Length: 354aa    MW: 37310.9 Da    PI: 5.7236
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
evm.model.supercontig_158.7genomeASGPBView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1781.1e-24254316163
                                  XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                       bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                  e+elkr++rkq+NRe+ArrsR+RK+ae+eeL+ +v++L++eN+ L++el++l++e++kl+se+
  evm.model.supercontig_158.7 254 ERELKRQKRKQSNRESARRSRLRKQAECEELQARVETLTNENHNLRDELQRLSEECEKLTSEN 316
                                  89***********************************************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077775.6E-30194IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.2E-8116225No hitNo description
Gene3DG3DSA:1.20.5.1701.8E-21248313No hitNo description
PfamPF001705.8E-22254316IPR004827Basic-leucine zipper domain
SMARTSM003382.7E-23254318IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.53256319IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.63E-12257313No hitNo description
CDDcd147023.37E-26259309No hitNo description
PROSITE patternPS000360261276IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MGTGEESTPP KPSKPASSTQ EIPTTPPYPD WSSSMQAYYG AGATPPPFFA STVASPGPHP  60
YLWGSQHPLI PPYGTPVPYP AIYSPGGVYA HHSMTTTPSL APTNMEVEGK GPDTKERTSV  120
KKSKGTSGGK SVEGGKAASG SGNDGASQSA ESGSEGSSDG TDENPNQQEY AGSKKGSFDQ  180
MLADANAQNN TAGAIQPSVP GKPVVSMPAT NLNIGMDLWN ASSAASGAAK MRPNPSGASS  240
AIAAPMPEQW IQDERELKRQ KRKQSNRESA RRSRLRKQAE CEELQARVET LTNENHNLRD  300
ELQRLSEECE KLTSENNSIK EELTRVCGPD AIANLEQTAK ETVAHSRGGE GNS*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1270276RRSRLRK
2270277RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010999953.10.0PREDICTED: G-box-binding factor 1-like
SwissprotP427741e-127GBF1_ARATH; G-box-binding factor 1
TrEMBLA9PIG90.0A9PIG9_POPTR; Uncharacterized protein
STRINGPOPTR_0007s12460.10.0(Populus trichocarpa)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MalvidsOGEM72742643
Representative plantOGRP7001767
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.11e-113G-box binding factor 1